Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Amph | Bin1 | G3GV67 | G3HKJ6 | Amphiphysin. | Myc box-dependent-interacting protein 1. | 0.990 |
Amph | Dner | G3GV67 | G3IFZ3 | Amphiphysin. | Delta and Notch-like epidermal growth factor-related receptor. | 0.722 |
Amph | Homer3 | G3GV67 | G3H482 | Amphiphysin. | Homer protein-like 3. | 0.604 |
Amph | I79_008993 | G3GV67 | G3HEK7 | Amphiphysin. | Rho GTPase-activating protein 26. | 0.594 |
Amph | Zic4 | G3GV67 | G3GT98 | Amphiphysin. | Zinc finger protein ZIC 4. | 0.655 |
Bin1 | Amph | G3HKJ6 | G3GV67 | Myc box-dependent-interacting protein 1. | Amphiphysin. | 0.990 |
Bin1 | Cdr2l | G3HKJ6 | G3GTG1 | Myc box-dependent-interacting protein 1. | Cerebellar degeneration-related protein 2-like. | 0.440 |
Bin1 | Dner | G3HKJ6 | G3IFZ3 | Myc box-dependent-interacting protein 1. | Delta and Notch-like epidermal growth factor-related receptor. | 0.687 |
Bin1 | Homer3 | G3HKJ6 | G3H482 | Myc box-dependent-interacting protein 1. | Homer protein-like 3. | 0.659 |
Bin1 | I79_008993 | G3HKJ6 | G3HEK7 | Myc box-dependent-interacting protein 1. | Rho GTPase-activating protein 26. | 0.471 |
Bin1 | Zic4 | G3HKJ6 | G3GT98 | Myc box-dependent-interacting protein 1. | Zinc finger protein ZIC 4. | 0.555 |
Cdr2l | Bin1 | G3GTG1 | G3HKJ6 | Cerebellar degeneration-related protein 2-like. | Myc box-dependent-interacting protein 1. | 0.440 |
Cdr2l | Dner | G3GTG1 | G3IFZ3 | Cerebellar degeneration-related protein 2-like. | Delta and Notch-like epidermal growth factor-related receptor. | 0.521 |
Cdr2l | Homer3 | G3GTG1 | G3H482 | Cerebellar degeneration-related protein 2-like. | Homer protein-like 3. | 0.912 |
Cdr2l | I79_008993 | G3GTG1 | G3HEK7 | Cerebellar degeneration-related protein 2-like. | Rho GTPase-activating protein 26. | 0.680 |
Cdr2l | Zic4 | G3GTG1 | G3GT98 | Cerebellar degeneration-related protein 2-like. | Zinc finger protein ZIC 4. | 0.543 |
Dner | Amph | G3IFZ3 | G3GV67 | Delta and Notch-like epidermal growth factor-related receptor. | Amphiphysin. | 0.722 |
Dner | Bin1 | G3IFZ3 | G3HKJ6 | Delta and Notch-like epidermal growth factor-related receptor. | Myc box-dependent-interacting protein 1. | 0.687 |
Dner | Cdr2l | G3IFZ3 | G3GTG1 | Delta and Notch-like epidermal growth factor-related receptor. | Cerebellar degeneration-related protein 2-like. | 0.521 |
Dner | Homer3 | G3IFZ3 | G3H482 | Delta and Notch-like epidermal growth factor-related receptor. | Homer protein-like 3. | 0.759 |
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