STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DekProtein DEK. (309 aa)    
Predicted Functional Partners:
Upf1
Regulator of nonsense transcripts 1.
    
 
 0.911
Sf3b1
Splicing factor 3B subunit 1-like protein.
   
 
 0.896
Mybbp1a
Myb-binding protein 1A.
     
 0.856
Baz1b
Tyrosine-protein kinase BAZ1B.
    
 0.839
I79_009364
Transcription factor AP-2 alpha.
    
 0.834
I79_013613
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
   
 0.816
Nup214
Nuclear pore complex protein Nup214.
      
 0.786
Ddx21
Nucleolar RNA helicase 2.
     
 0.719
Myo1c
Myosin-Ic; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.702
Rnps1
RNA-binding protein with serine-rich domain 1.
   
  
 0.656
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.