STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Reep4Receptor expression-enhancing protein. (257 aa)    
Predicted Functional Partners:
I79_021824
Atlastin-1.
   
 
 0.604
Nemp1
Transmembrane protein 194A.
   
  
 0.569
Ccdc34
Coiled-coil domain-containing protein 34.
   
  
 0.531
I79_001540
DEP domain-containing protein 1B.
      
 0.502
Ccdc77
Coiled-coil domain-containing protein 77.
      
 0.499
I79_005675
Src kinase-associated phosphoprotein 1.
      
 0.493
Fig4
Polyphosphoinositide phosphatase.
      
 0.483
I79_021367
Atlastin-3.
   
 
 0.429
Atl3
Atlastin-3.
   
 
 0.429
Reep1
Receptor expression-enhancing protein.
  
 
 
0.419
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.