STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VillVillin-like protein. (826 aa)    
Predicted Functional Partners:
Cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 
 0.587
Cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.574
Slc25a30
Conserved oligomeric Golgi complex subunit 3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.557
I79_000592
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
   
  0.521
Twf1
Twinfilin-1.
   
 0.501
I79_012275
Wiskott-Aldrich syndrome protein-like.
    
 
 0.443
Smim7
Putative UPF0608 protein C19orf42 like protein.
    
 
 0.430
Cog4
Conserved oligomeric Golgi complex subunit 4.
    
 
 0.430
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.