STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dusp29Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (217 aa)    
Predicted Functional Partners:
I79_023663
Membrane-spanning 4-domains subfamily A member 8A.
      
 0.557
Vrk3
Serine/threonine-protein kinase VRK3.
    
 0.543
Smim12
Uncharacterized protein.
   
 
 0.500
Gabpb1
GA-binding protein subunit beta-1.
   
 0.488
Mthfsd
Methenyltetrahydrofolate synthetase domain-containing protein.
   
    0.474
Pgp
Phosphoglycolate phosphatase.
      
 0.470
I79_016847
Transcription factor BTF3; Belongs to the NAC-beta family.
   
    0.459
Npas4
Neuronal PAS domain-containing protein 4.
   
    0.443
I79_001733
Mitogen-activated protein kinase.
   
 0.422
I79_009500
Mitogen-activated protein kinase 1.
   
 0.422
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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