STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1r27Dysferlin-interacting protein 1. (154 aa)    
Predicted Functional Partners:
Ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.624
Hvcn1
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.624
Ppp1ca
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit.
   
 0.624
CgPICR_008504
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit-like protein.
   
 0.624
Ankrd39
Ankyrin repeat domain-containing protein 23.
  
    0.600
I79_024821
Ankyrin repeat domain-containing protein 36.
  
 
 0.540
I79_024997
Ankyrin repeat domain-containing protein 26.
  
 
 0.533
Bad
Protein phosphatase 1 regulatory subunit 14B.
    
 0.507
Ndufa3
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3.
      
 0.501
Rnasel
2-5A-dependent ribonuclease.
  
  0.497
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.