STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_002478BET1-like. (118 aa)    
Predicted Functional Partners:
Scfd1
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.998
I79_013357
Golgi SNAP receptor complex member 1.
    
 0.998
Sec22b
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.997
Stx5
Syntaxin-5; Belongs to the syntaxin family.
   
 0.997
Gosr2
Golgi SNAP receptor complex member 2.
   
 0.997
Ykt6
Synaptobrevin-like YKT6; Belongs to the synaptobrevin family.
    
 0.996
I79_020190
General vesicular transport factor p115.
    
 0.981
I79_023329
Syntaxin-5.
   
 0.972
I79_025800
Golgi SNAP receptor complex member 2.
   
 0.971
Vamp8
Vesicle-associated membrane protein 8.
    
 
 0.970
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.