STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_002869Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (479 aa)    
Predicted Functional Partners:
Atg101
Autophagy-related protein 101.
    
 0.997
Rb1cc1
RB1-inducible coiled-coil protein 1.
    
 0.992
Ulk1
Serine/threonine-protein kinase ULK1.
   
 0.990
I79_001738
Serine/threonine-protein kinase ULK2.
   
 0.937
Ulk2
Serine/threonine-protein kinase ULK2.
   
 0.937
Atg14
Uncharacterized protein KIAA0831.
   
 0.905
Pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.898
Rptor
Regulatory-associated protein of mTOR.
    
 0.873
Mtor
Serine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family.
     
 0.853
Mlst8
Target of rapamycin complex subunit LST8.
     
 0.831
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.