Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CgPICR_012052 | I79_002944 | G3GTE4 | G3GYN9 | Growth factor receptor-bound protein 2. | Phosphatidylinositol 3-kinase regulatory subunit gamma. | 0.801 |
CgPICR_012052 | I79_003177 | G3GTE4 | G3GZB6 | Growth factor receptor-bound protein 2. | Platelet-derived growth factor receptor-like protein. | 0.632 |
CgPICR_012052 | Pdgfb | G3GTE4 | G3I2J0 | Growth factor receptor-bound protein 2. | Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. | 0.417 |
Gdnf | I79_003177 | G3HJV8 | G3GZB6 | Glial cell line-derived neurotrophic factor. | Platelet-derived growth factor receptor-like protein. | 0.550 |
I79_002944 | CgPICR_012052 | G3GYN9 | G3GTE4 | Phosphatidylinositol 3-kinase regulatory subunit gamma. | Growth factor receptor-bound protein 2. | 0.801 |
I79_002944 | I79_003177 | G3GYN9 | G3GZB6 | Phosphatidylinositol 3-kinase regulatory subunit gamma. | Platelet-derived growth factor receptor-like protein. | 0.540 |
I79_002944 | Pdgfb | G3GYN9 | G3I2J0 | Phosphatidylinositol 3-kinase regulatory subunit gamma. | Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. | 0.426 |
I79_003177 | CgPICR_012052 | G3GZB6 | G3GTE4 | Platelet-derived growth factor receptor-like protein. | Growth factor receptor-bound protein 2. | 0.632 |
I79_003177 | Gdnf | G3GZB6 | G3HJV8 | Platelet-derived growth factor receptor-like protein. | Glial cell line-derived neurotrophic factor. | 0.550 |
I79_003177 | I79_002944 | G3GZB6 | G3GYN9 | Platelet-derived growth factor receptor-like protein. | Phosphatidylinositol 3-kinase regulatory subunit gamma. | 0.540 |
I79_003177 | I79_008095 | G3GZB6 | G3HC91 | Platelet-derived growth factor receptor-like protein. | Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family. | 0.749 |
I79_003177 | I79_012764 | G3GZB6 | G3HPP9 | Platelet-derived growth factor receptor-like protein. | Ras GTPase-activating protein 1. | 0.560 |
I79_003177 | Nrp1 | G3GZB6 | G3HZ57 | Platelet-derived growth factor receptor-like protein. | Neuropilin; Belongs to the neuropilin family. | 0.595 |
I79_003177 | Nrp2 | G3GZB6 | G3HDM0 | Platelet-derived growth factor receptor-like protein. | Neuropilin; Belongs to the neuropilin family. | 0.671 |
I79_003177 | Pdgfb | G3GZB6 | G3I2J0 | Platelet-derived growth factor receptor-like protein. | Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. | 0.587 |
I79_003177 | Tusc3 | G3GZB6 | G3I127 | Platelet-derived growth factor receptor-like protein. | Tumor suppressor candidate 3. | 0.595 |
I79_003177 | Vegfc | G3GZB6 | G3HGL6 | Platelet-derived growth factor receptor-like protein. | Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. | 0.639 |
I79_008095 | I79_003177 | G3HC91 | G3GZB6 | Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family. | Platelet-derived growth factor receptor-like protein. | 0.749 |
I79_008095 | Nrp1 | G3HC91 | G3HZ57 | Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family. | Neuropilin; Belongs to the neuropilin family. | 0.673 |
I79_012764 | I79_003177 | G3HPP9 | G3GZB6 | Ras GTPase-activating protein 1. | Platelet-derived growth factor receptor-like protein. | 0.560 |
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