Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Agrn | I79_003637 | G3I437 | G3H0H9 | Agrin. | Low-density lipoprotein receptor-related protein 4. | 0.913 |
Agrn | I79_014534 | G3I437 | G3HUC5 | Agrin. | Muscle, skeletal receptor tyrosine protein kinase. | 0.732 |
Agrn | I79_022918 | G3I437 | G3IGK1 | Agrin. | Low-density lipoprotein receptor-related protein 1B. | 0.649 |
Ankra2 | I79_003637 | G3I0G2 | G3H0H9 | Ankyrin repeat family A protein 2. | Low-density lipoprotein receptor-related protein 4. | 0.881 |
Clu | Gc | G3HNJ3 | G3IHJ6 | Clusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. | Vitamin D-binding protein. | 0.457 |
Clu | I79_003637 | G3HNJ3 | G3H0H9 | Clusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. | Low-density lipoprotein receptor-related protein 4. | 0.622 |
Clu | Ltf | G3HNJ3 | G3HTA2 | Clusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. | Lactotransferrin; Belongs to the transferrin family. | 0.867 |
Gc | Clu | G3IHJ6 | G3HNJ3 | Vitamin D-binding protein. | Clusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. | 0.457 |
Gc | I79_003637 | G3IHJ6 | G3H0H9 | Vitamin D-binding protein. | Low-density lipoprotein receptor-related protein 4. | 0.618 |
Gc | I79_010173 | G3IHJ6 | G3HHR5 | Vitamin D-binding protein. | Cubilin. | 0.880 |
I79_003637 | Agrn | G3H0H9 | G3I437 | Low-density lipoprotein receptor-related protein 4. | Agrin. | 0.913 |
I79_003637 | Ankra2 | G3H0H9 | G3I0G2 | Low-density lipoprotein receptor-related protein 4. | Ankyrin repeat family A protein 2. | 0.881 |
I79_003637 | Clu | G3H0H9 | G3HNJ3 | Low-density lipoprotein receptor-related protein 4. | Clusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. | 0.622 |
I79_003637 | Gc | G3H0H9 | G3IHJ6 | Low-density lipoprotein receptor-related protein 4. | Vitamin D-binding protein. | 0.618 |
I79_003637 | I79_009834 | G3H0H9 | G3HGU3 | Low-density lipoprotein receptor-related protein 4. | Disabled-like 2. | 0.803 |
I79_003637 | I79_010173 | G3H0H9 | G3HHR5 | Low-density lipoprotein receptor-related protein 4. | Cubilin. | 0.629 |
I79_003637 | I79_014534 | G3H0H9 | G3HUC5 | Low-density lipoprotein receptor-related protein 4. | Muscle, skeletal receptor tyrosine protein kinase. | 0.662 |
I79_003637 | I79_022918 | G3H0H9 | G3IGK1 | Low-density lipoprotein receptor-related protein 4. | Low-density lipoprotein receptor-related protein 1B. | 0.658 |
I79_003637 | Itsn2 | G3H0H9 | G3GXN3 | Low-density lipoprotein receptor-related protein 4. | Intersectin-2. | 0.676 |
I79_003637 | Ltf | G3H0H9 | G3HTA2 | Low-density lipoprotein receptor-related protein 4. | Lactotransferrin; Belongs to the transferrin family. | 0.647 |
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