STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_003637Low-density lipoprotein receptor-related protein 4. (766 aa)    
Predicted Functional Partners:
Agrn
Agrin.
    
 0.913
Ankra2
Ankyrin repeat family A protein 2.
    
 0.881
I79_009834
Disabled-like 2.
    
 0.803
Itsn2
Intersectin-2.
    
 0.676
I79_014534
Muscle, skeletal receptor tyrosine protein kinase.
   
 0.662
I79_022918
Low-density lipoprotein receptor-related protein 1B.
 
   
0.658
Ltf
Lactotransferrin; Belongs to the transferrin family.
     
 0.647
I79_010173
Cubilin.
   
 0.629
Clu
Clusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins.
    
 
 0.622
Gc
Vitamin D-binding protein.
    
 0.618
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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