STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tinagl1Tubulointerstitial nephritis antigen-like; Belongs to the peptidase C1 family. (465 aa)    
Predicted Functional Partners:
Tmem184a
Transmembrane protein 184A.
      
 0.701
Dlg4
Disks large-like 4.
      
 0.671
Dag1
Dystroglycan.
      
 0.655
Aga
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase.
      
 0.639
Yeats2
YEATS domain-containing protein 2.
      
 0.599
Lgals3bp
Galectin-3-binding protein.
      
 0.592
I79_000117
GDNF family receptor alpha-like.
      
 0.540
Hspg2
Basement membrane-specific heparan sulfate proteoglycan core protein.
   
 
 0.531
Adgrg1
G-protein coupled receptor 56; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.509
Cacng2
Voltage-dependent calcium channel gamma-2 subunit; Regulates the trafficking and gating properties of AMPA- selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization. Does not show subunit-specific AMPA receptor regulation and regulates all AMPAR subunits. Thought to stabilize the calcium channel in an inactivated (closed) state; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
      
 0.478
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.