STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trnt1tRNA-nucleotidyltransferase 1, mitochondrial; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (434 aa)    
Predicted Functional Partners:
Apmap
Adipocyte plasma membrane-associated protein.
  
 0.886
I79_000086
Bifunctional aminoacyl-tRNA synthetase.
  
  
 0.827
Yars1
Tyrosine--tRNA ligase.
  
 
 0.814
Hlcs
Biotin--protein ligase.
  
  
 0.794
Atp5f1d
ATP synthase subunit delta, mitochondrial.
     
 0.681
Vps29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
  
 
 0.678
Ybey
Putative metalloprotease C21orf57-like.
     
 0.650
Pus7l
Pseudouridylate synthase 7-like-like protein.
   
  
 0.634
Tti1
Uncharacterized protein KIAA0406-like.
    
 
 0.630
Elac2
Zinc phosphodiesterase ELAC protein 2.
  
  
 0.630
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.