STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RabifGuanine nucleotide exchange factor MSS4. (128 aa)    
Predicted Functional Partners:
H671_1g1639
Ras-related protein Rab-8A-like protein.
    
 
 0.889
Cdc42
Cell division control protein 42-like.
    
 
 0.805
CgPICR_012052
Growth factor receptor-bound protein 2.
      
 0.781
Arf6
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.712
Sos2
Son of sevenless-like 2.
      
 0.709
Itsn1
Intersectin-1.
      
 0.704
Itsn2
Intersectin-2.
      
 0.704
Eif2b5
Translation initiation factor eIF-2B subunit epsilon.
      
 0.660
Rhoa
Transforming protein RhoA.
    
 
 0.634
Rab8b
Ras-related protein Rab-8B-like protein.
    
 
 0.627
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.