STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rab3aRas-related protein Rab-3A-like protein. (220 aa)    
Predicted Functional Partners:
I79_004243
Rabphilin-3A.
   
 
 0.988
Rims1
Regulating synaptic membrane exocytosis protein 1.
    
 0.965
I79_014942
Regulating synaptic membrane exocytosis protein 2.
    
 0.930
Syp
Synaptophysin.
   
 0.864
Syt1
Synaptotagmin-1.
   
 0.823
CgPICR_008620
Guanine nucleotide exchange factor MSS4-like protein.
    
 
 0.757
I79_000431
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.741
I79_000592
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
   
 0.735
I79_001701
MICAL-like protein 2.
      
 0.708
Atp6v1g2
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
  
 0.703
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.