Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dock3 | I79_005315 | G3H8A9 | G3H4V2 | Dedicator of cytokinesis protein 3; Belongs to the DOCK family. | FERM, RhoGEF and pleckstrin domain-containing protein 2. | 0.513 |
Dock3 | Rnd1 | G3H8A9 | G3I6J9 | Dedicator of cytokinesis protein 3; Belongs to the DOCK family. | Rho-related GTP-binding protein Rho6. | 0.439 |
I79_005315 | Dock3 | G3H4V2 | G3H8A9 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Dedicator of cytokinesis protein 3; Belongs to the DOCK family. | 0.513 |
I79_005315 | I79_007063 | G3H4V2 | G3H9I9 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Hepatocyte growth factor receptor. | 0.488 |
I79_005315 | I79_016886 | G3H4V2 | G3I0J8 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Uncharacterized protein. | 0.564 |
I79_005315 | Mst1r | G3H4V2 | G3H8D6 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Macrophage-stimulating protein receptor. | 0.488 |
I79_005315 | Nrp1 | G3H4V2 | G3HZ57 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Neuropilin; Belongs to the neuropilin family. | 0.696 |
I79_005315 | Pip5k1a | G3H4V2 | G3H2Z6 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Phosphatidylinositol-4-phosphate 5-kinase type-1 alpha. | 0.616 |
I79_005315 | Pip5k1c | G3H4V2 | G3HSK5 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Phosphatidylinositol-4-phosphate 5-kinase type-1 gamma. | 0.727 |
I79_005315 | Rnd1 | G3H4V2 | G3I6J9 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Rho-related GTP-binding protein Rho6. | 0.546 |
I79_005315 | Sema3a | G3H4V2 | G3HN27 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Semaphorin-3A-like protein; Belongs to the semaphorin family. | 0.568 |
I79_005315 | Sema3b | G3H4V2 | G3H8C9 | FERM, RhoGEF and pleckstrin domain-containing protein 2. | Semaphorin-3B; Belongs to the semaphorin family. | 0.503 |
I79_007063 | I79_005315 | G3H9I9 | G3H4V2 | Hepatocyte growth factor receptor. | FERM, RhoGEF and pleckstrin domain-containing protein 2. | 0.488 |
I79_007063 | Mst1r | G3H9I9 | G3H8D6 | Hepatocyte growth factor receptor. | Macrophage-stimulating protein receptor. | 0.724 |
I79_007063 | Nrp1 | G3H9I9 | G3HZ57 | Hepatocyte growth factor receptor. | Neuropilin; Belongs to the neuropilin family. | 0.592 |
I79_007063 | Rnd1 | G3H9I9 | G3I6J9 | Hepatocyte growth factor receptor. | Rho-related GTP-binding protein Rho6. | 0.638 |
I79_007063 | Sema3a | G3H9I9 | G3HN27 | Hepatocyte growth factor receptor. | Semaphorin-3A-like protein; Belongs to the semaphorin family. | 0.586 |
I79_007063 | Sema3b | G3H9I9 | G3H8C9 | Hepatocyte growth factor receptor. | Semaphorin-3B; Belongs to the semaphorin family. | 0.609 |
I79_016886 | I79_005315 | G3I0J8 | G3H4V2 | Uncharacterized protein. | FERM, RhoGEF and pleckstrin domain-containing protein 2. | 0.564 |
Mst1r | I79_005315 | G3H8D6 | G3H4V2 | Macrophage-stimulating protein receptor. | FERM, RhoGEF and pleckstrin domain-containing protein 2. | 0.488 |
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