STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_005315FERM, RhoGEF and pleckstrin domain-containing protein 2. (1018 aa)    
Predicted Functional Partners:
Pip5k1c
Phosphatidylinositol-4-phosphate 5-kinase type-1 gamma.
     
 0.727
Nrp1
Neuropilin; Belongs to the neuropilin family.
     
 0.696
Pip5k1a
Phosphatidylinositol-4-phosphate 5-kinase type-1 alpha.
     
 0.616
Sema3a
Semaphorin-3A-like protein; Belongs to the semaphorin family.
     
 0.568
I79_016886
Uncharacterized protein.
      
 0.564
Rnd1
Rho-related GTP-binding protein Rho6.
    
 0.546
Dock3
Dedicator of cytokinesis protein 3; Belongs to the DOCK family.
     
 0.513
Sema3b
Semaphorin-3B; Belongs to the semaphorin family.
     
 0.503
Mst1r
Macrophage-stimulating protein receptor.
    
 0.488
I79_007063
Hepatocyte growth factor receptor.
    
 0.488
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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