STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_005398UPF0195 protein FAM96A. (108 aa)    
Predicted Functional Partners:
Mms19
MMS19 nucleotide excision repair protein-like.
    
 0.918
I79_003484
Putative cytosolic iron-sulfur protein assembly protein CIAO1.
    
 0.830
Ciao1
Putative cytosolic iron-sulfur protein assembly protein CIAO1.
    
 0.830
Narf
Nuclear prelamin A recognition factor; Belongs to the NARF family.
    
 0.649
Ciao3
Cytosolic Fe-S cluster assembly factor NARFL; Belongs to the NARF family.
    
 0.649
Ercc2
TFIIH basal transcription factor complex helicase subunit.
    
 0.578
I79_012652
TFIIH basal transcription factor complex helicase subunit.
    
 0.578
Fbxl5
F-box/LRR-repeat protein 5.
    
 
 0.437
NDOR1
NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
    
 
 0.430
I79_024482
Glutaredoxin-3.
    
 
 0.416
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.