Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cat | Glrx | G3GYY6 | G3H756 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Glutaredoxin-1. | 0.530 |
Cat | Gsr | G3GYY6 | G3H609 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Glutathione reductase, mitochondrial. | 0.738 |
Cat | I79_005447 | G3GYY6 | G3H572 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Glutathione peroxidase 3. | 0.469 |
Cat | I79_009034 | G3GYY6 | G3HEP6 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Thioredoxin reductase 2, mitochondrial. | 0.402 |
Cat | I79_013121 | G3GYY6 | G3HQL6 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Thioredoxin reductase 1, cytoplasmic; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.402 |
Cat | I79_016330 | G3GYY6 | G3HZ35 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Thioredoxin domain-containing protein 2. | 0.661 |
Cat | Sod2 | G3GYY6 | G3HWB8 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.977 |
Cat | Sod3 | G3GYY6 | G3ID79 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.980 |
Cat | Txnrd2 | G3GYY6 | G3HEP5 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Thioredoxin reductase 2, mitochondrial. | 0.402 |
Ero1b | I79_005447 | G3HWE1 | G3H572 | ERO1-like protein beta. | Glutathione peroxidase 3. | 0.493 |
Ero1b | I79_016330 | G3HWE1 | G3HZ35 | ERO1-like protein beta. | Thioredoxin domain-containing protein 2. | 0.679 |
Glrx | Cat | G3H756 | G3GYY6 | Glutaredoxin-1. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.530 |
Glrx | Gsr | G3H756 | G3H609 | Glutaredoxin-1. | Glutathione reductase, mitochondrial. | 0.759 |
Glrx | I79_005447 | G3H756 | G3H572 | Glutaredoxin-1. | Glutathione peroxidase 3. | 0.452 |
Glrx | I79_009034 | G3H756 | G3HEP6 | Glutaredoxin-1. | Thioredoxin reductase 2, mitochondrial. | 0.546 |
Glrx | I79_013121 | G3H756 | G3HQL6 | Glutaredoxin-1. | Thioredoxin reductase 1, cytoplasmic; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.581 |
Glrx | I79_016330 | G3H756 | G3HZ35 | Glutaredoxin-1. | Thioredoxin domain-containing protein 2. | 0.644 |
Glrx | Sod2 | G3H756 | G3HWB8 | Glutaredoxin-1. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.621 |
Glrx | Sod3 | G3H756 | G3ID79 | Glutaredoxin-1. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.568 |
Glrx | Txnrd2 | G3H756 | G3HEP5 | Glutaredoxin-1. | Thioredoxin reductase 2, mitochondrial. | 0.829 |
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