Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Barhl2 | Foxn4 | G3I0Y5 | G3HI84 | BarH-like 2 homeobox protein. | Forkhead box protein N4. | 0.472 |
Barhl2 | Isl1 | G3I0Y5 | G3H207 | BarH-like 2 homeobox protein. | Insulin gene enhancer protein ISL-1. | 0.475 |
Barhl2 | Ptf1a | G3I0Y5 | G3H5C8 | BarH-like 2 homeobox protein. | Pancreas transcription factor 1 subunit alpha. | 0.601 |
Foxn4 | Barhl2 | G3HI84 | G3I0Y5 | Forkhead box protein N4. | BarH-like 2 homeobox protein. | 0.472 |
Foxn4 | Ptf1a | G3HI84 | G3H5C8 | Forkhead box protein N4. | Pancreas transcription factor 1 subunit alpha. | 0.688 |
Foxn4 | Vsx1 | G3HI84 | G3H6Z6 | Forkhead box protein N4. | Visual system homeobox 1. | 0.596 |
Ins | Pax4 | G3HXZ8 | G3GZ83 | Multifunctional fusion protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver; Belongs to the ferritin family. | Paired box protein Pax-4. | 0.630 |
Ins | Pdx1 | G3HXZ8 | G3GWI1 | Multifunctional fusion protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver; Belongs to the ferritin family. | Pancreas/duodenum homeobox protein 1. | 0.758 |
Ins | Ptf1a | G3HXZ8 | G3H5C8 | Multifunctional fusion protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver; Belongs to the ferritin family. | Pancreas transcription factor 1 subunit alpha. | 0.670 |
Isl1 | Barhl2 | G3H207 | G3I0Y5 | Insulin gene enhancer protein ISL-1. | BarH-like 2 homeobox protein. | 0.475 |
Isl1 | Mnx1 | G3H207 | G3I7R6 | Insulin gene enhancer protein ISL-1. | Motor neuron and pancreas homeobox protein 1. | 0.574 |
Isl1 | Pax4 | G3H207 | G3GZ83 | Insulin gene enhancer protein ISL-1. | Paired box protein Pax-4. | 0.590 |
Isl1 | Ptf1a | G3H207 | G3H5C8 | Insulin gene enhancer protein ISL-1. | Pancreas transcription factor 1 subunit alpha. | 0.649 |
Isl1 | Vsx1 | G3H207 | G3H6Z6 | Insulin gene enhancer protein ISL-1. | Visual system homeobox 1. | 0.530 |
Mnx1 | Isl1 | G3I7R6 | G3H207 | Motor neuron and pancreas homeobox protein 1. | Insulin gene enhancer protein ISL-1. | 0.574 |
Mnx1 | Pax4 | G3I7R6 | G3GZ83 | Motor neuron and pancreas homeobox protein 1. | Paired box protein Pax-4. | 0.589 |
Mnx1 | Ptf1a | G3I7R6 | G3H5C8 | Motor neuron and pancreas homeobox protein 1. | Pancreas transcription factor 1 subunit alpha. | 0.612 |
Pax4 | Ins | G3GZ83 | G3HXZ8 | Paired box protein Pax-4. | Multifunctional fusion protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver; Belongs to the ferritin family. | 0.630 |
Pax4 | Isl1 | G3GZ83 | G3H207 | Paired box protein Pax-4. | Insulin gene enhancer protein ISL-1. | 0.590 |
Pax4 | Mnx1 | G3GZ83 | G3I7R6 | Paired box protein Pax-4. | Motor neuron and pancreas homeobox protein 1. | 0.589 |
page 1 of 3