STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl1039S ribosomal protein L10, mitochondrial. (262 aa)    
Predicted Functional Partners:
I79_025957
39S ribosomal protein L16, mitochondrial.
   
 0.973
Mrpl11
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.966
Dap3
28S ribosomal protein S29, mitochondrial.
   
 
 0.965
Mrpl4
39S ribosomal protein L4, mitochondrial.
   
 
 0.960
Mrpl49
39S ribosomal protein L49, mitochondrial.
   
   0.953
Mrps9
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.936
I79_013785
39S ribosomal protein L32, mitochondrial.
   
   0.936
Mrpl40
39S ribosomal protein L40, mitochondrial.
   
 
 0.935
Mrps15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.932
Mrpl41
39S ribosomal protein L41, mitochondrial.
   
 
 0.931
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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