STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_00569339S ribosomal protein L45, mitochondrial. (273 aa)    
Predicted Functional Partners:
Mrpl15
39S ribosomal protein L15, mitochondrial.
   
   0.954
Mrpl49
39S ribosomal protein L49, mitochondrial.
   
 
 0.948
Mrpl11
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 0.936
I79_013161
28S ribosomal protein S18b, mitochondrial.
   
 
 0.930
Mrpl41
39S ribosomal protein L41, mitochondrial.
   
 0.928
I79_000331
28S ribosomal protein S25, mitochondrial.
   
 
 0.923
Mrpl58
Immature colon carcinoma transcript 1 protein.
   
 
 0.920
Mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.920
Mrpl27
39S ribosomal protein L27, mitochondrial.
   
 
 0.916
Mrpl23
39S ribosomal protein L23, mitochondrial.
   
 
 0.914
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.