STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_005824Phenylalanine-4-hydroxylase. (420 aa)    
Predicted Functional Partners:
Pcbd1
Pterin-4-alpha-carbinolamine dehydratase.
  
 0.910
I79_023266
Fumarylacetoacetase.
  
  
 0.704
Qdpr
Dihydropteridine reductase-like protein.
 
 
 0.703
Fah
Fumarylacetoacetase.
  
  
 0.658
Rgn
Regucalcin.
   
  
 0.639
Got2
Aspartate aminotransferase.
  
  
 0.571
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 
 0.569
Pnmt
Phenylethanolamine N-methyltransferase.
      
 0.562
Gc
Vitamin D-binding protein.
   
  
 0.560
Got1
Aspartate aminotransferase.
  
  
 0.531
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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