STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psd3PH and SEC7 domain-containing protein 3. (1286 aa)    
Predicted Functional Partners:
I79_008921
GPI ethanolamine phosphate transferase 2.
      
 0.568
Tmem161b
Transmembrane protein 161B.
      
 0.566
Arl14
ADP-ribosylation factor-like protein 14; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.465
Arf6
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.461
I79_012489
Fibronectin type III domain containing 3c.
      
 0.416
Fndc3a
Fibronectin type-III domain-containing protein 3a.
      
 0.416
Dcun1d4
DCN1-like protein.
      
 0.410
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.