STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_006472Polypyrimidine tract-binding protein 1. (119 aa)    
Predicted Functional Partners:
Srsf1
Splicing factor, arginine/serine-rich 1, transcript variant 1.
   
 0.701
Hnrnpa2b1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.655
Pcbp1
Poly(RC)-binding protein 1.
   
 0.641
Tra2b
Transformer-2 protein-like beta.
   
 0.613
Prune1
Protein prune-like.
      
 0.598
Hnrnpu
Heterogeneous nuclear ribonucleoprotein U.
   
 0.583
I79_006752
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.582
H671_xg20125
Heterogeneous nuclear ribonucleoprotein A1-like protein 2.
   
 0.582
I79_022422
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.582
Hnrnpa1
Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3.
   
 0.582
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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