Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arih2 | Marchf7 | G3IB79 | G3H8K8 | Protein ariadne-2-like. | E3 ubiquitin-protein ligase MARCH7. | 0.418 |
Hm13 | Marchf7 | G3HEA9 | G3H8K8 | Minor histocompatibility antigen H13. | E3 ubiquitin-protein ligase MARCH7. | 0.444 |
I79_009372 | I79_012144 | G3HFL0 | G3HN14 | Proteasome activator complex subunit 4. | Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. | 0.597 |
I79_009372 | Marchf7 | G3HFL0 | G3H8K8 | Proteasome activator complex subunit 4. | E3 ubiquitin-protein ligase MARCH7. | 0.424 |
I79_009372 | Spata5l1 | G3HFL0 | G3HMD6 | Proteasome activator complex subunit 4. | Spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family. | 0.518 |
I79_012144 | I79_009372 | G3HN14 | G3HFL0 | Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. | Proteasome activator complex subunit 4. | 0.597 |
I79_012144 | Marchf7 | G3HN14 | G3H8K8 | Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. | E3 ubiquitin-protein ligase MARCH7. | 0.417 |
I79_013771 | Marchf7 | G3HSE0 | G3H8K8 | Calcitonin. | E3 ubiquitin-protein ligase MARCH7. | 0.472 |
I79_023104 | Marchf7 | G3IH26 | G3H8K8 | CCR4-NOT transcription complex subunit 2. | E3 ubiquitin-protein ligase MARCH7. | 0.586 |
Marchf7 | Arih2 | G3H8K8 | G3IB79 | E3 ubiquitin-protein ligase MARCH7. | Protein ariadne-2-like. | 0.418 |
Marchf7 | Hm13 | G3H8K8 | G3HEA9 | E3 ubiquitin-protein ligase MARCH7. | Minor histocompatibility antigen H13. | 0.444 |
Marchf7 | I79_009372 | G3H8K8 | G3HFL0 | E3 ubiquitin-protein ligase MARCH7. | Proteasome activator complex subunit 4. | 0.424 |
Marchf7 | I79_012144 | G3H8K8 | G3HN14 | E3 ubiquitin-protein ligase MARCH7. | Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. | 0.417 |
Marchf7 | I79_013771 | G3H8K8 | G3HSE0 | E3 ubiquitin-protein ligase MARCH7. | Calcitonin. | 0.472 |
Marchf7 | I79_023104 | G3H8K8 | G3IH26 | E3 ubiquitin-protein ligase MARCH7. | CCR4-NOT transcription complex subunit 2. | 0.586 |
Marchf7 | Nck1 | G3H8K8 | G3HEY6 | E3 ubiquitin-protein ligase MARCH7. | Cytoplasmic protein NCK1. | 0.443 |
Marchf7 | Nck2 | G3H8K8 | G3H5P3 | E3 ubiquitin-protein ligase MARCH7. | Cytoplasmic protein. | 0.440 |
Marchf7 | Pdgfrb | G3H8K8 | G3HS35 | E3 ubiquitin-protein ligase MARCH7. | Beta-type platelet-derived growth factor receptor. | 0.431 |
Marchf7 | Spata5l1 | G3H8K8 | G3HMD6 | E3 ubiquitin-protein ligase MARCH7. | Spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family. | 0.417 |
Nck1 | Marchf7 | G3HEY6 | G3H8K8 | Cytoplasmic protein NCK1. | E3 ubiquitin-protein ligase MARCH7. | 0.443 |
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