Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arid4b | Gpr84 | G3HSF6 | G3I6B9 | AT-rich interactive domain-containing protein 4B. | G-protein coupled receptor 84. | 0.657 |
Arid4b | Hivep2 | G3HSF6 | G3H6W6 | AT-rich interactive domain-containing protein 4B. | Immunodeficiency virus type I enhancer-binding 2-like protein. | 0.580 |
Arid4b | Hivep3 | G3HSF6 | G3HCN7 | AT-rich interactive domain-containing protein 4B. | Transcription factor HIVEP3. | 0.653 |
Arid4b | I79_003731 | G3HSF6 | G3H0R4 | AT-rich interactive domain-containing protein 4B. | Iroquois-class homeodomain protein IRX-3. | 0.695 |
Arid4b | I79_006922 | G3HSF6 | G3H958 | AT-rich interactive domain-containing protein 4B. | A disintegrin and metalloproteinase with thrombospondin motifs 18. | 0.663 |
Arid4b | I79_023447 | G3HSF6 | G3IHY7 | AT-rich interactive domain-containing protein 4B. | Kinesin-like protein KIF1B. | 0.668 |
Arid4b | I79_024611 | G3HSF6 | G3IL49 | AT-rich interactive domain-containing protein 4B. | Signal peptide, CUB and EGF-like domain-containing protein 2. | 0.743 |
B3glct | I79_006922 | G3GWF3 | G3H958 | Beta-1,3-glucosyltransferase. | A disintegrin and metalloproteinase with thrombospondin motifs 18. | 0.575 |
Ccdc51 | I79_006922 | G3HKQ1 | G3H958 | Coiled-coil domain-containing protein 51. | A disintegrin and metalloproteinase with thrombospondin motifs 18. | 0.560 |
Gpr84 | Arid4b | G3I6B9 | G3HSF6 | G-protein coupled receptor 84. | AT-rich interactive domain-containing protein 4B. | 0.657 |
Gpr84 | Hivep2 | G3I6B9 | G3H6W6 | G-protein coupled receptor 84. | Immunodeficiency virus type I enhancer-binding 2-like protein. | 0.504 |
Gpr84 | Hivep3 | G3I6B9 | G3HCN7 | G-protein coupled receptor 84. | Transcription factor HIVEP3. | 0.504 |
Gpr84 | I79_003731 | G3I6B9 | G3H0R4 | G-protein coupled receptor 84. | Iroquois-class homeodomain protein IRX-3. | 0.613 |
Gpr84 | I79_006922 | G3I6B9 | G3H958 | G-protein coupled receptor 84. | A disintegrin and metalloproteinase with thrombospondin motifs 18. | 0.669 |
Gpr84 | I79_023447 | G3I6B9 | G3IHY7 | G-protein coupled receptor 84. | Kinesin-like protein KIF1B. | 0.569 |
Gpr84 | I79_024611 | G3I6B9 | G3IL49 | G-protein coupled receptor 84. | Signal peptide, CUB and EGF-like domain-containing protein 2. | 0.596 |
Hivep2 | Arid4b | G3H6W6 | G3HSF6 | Immunodeficiency virus type I enhancer-binding 2-like protein. | AT-rich interactive domain-containing protein 4B. | 0.580 |
Hivep2 | Gpr84 | G3H6W6 | G3I6B9 | Immunodeficiency virus type I enhancer-binding 2-like protein. | G-protein coupled receptor 84. | 0.504 |
Hivep2 | I79_003731 | G3H6W6 | G3H0R4 | Immunodeficiency virus type I enhancer-binding 2-like protein. | Iroquois-class homeodomain protein IRX-3. | 0.505 |
Hivep2 | I79_006922 | G3H6W6 | G3H958 | Immunodeficiency virus type I enhancer-binding 2-like protein. | A disintegrin and metalloproteinase with thrombospondin motifs 18. | 0.554 |
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