STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttc8Tetratricopeptide repeat protein 8. (505 aa)    
Predicted Functional Partners:
I79_010469
Bardet-Biedl syndrome 2 protein-like.
  
 0.994
Bbs9
Protein PTHB1.
    
 0.993
I79_001238
Bardet-Biedl syndrome 5 protein-like.
   
 0.986
I79_008980
Bardet-Biedl syndrome 4 protein-like.
   
 0.962
Bbs4
Bardet-Biedl syndrome 4 protein-like.
   
 0.962
Klhl40
Kelch repeat and BTB domain-containing protein 5.
   
 0.917
Lztfl1
Leucine zipper transcription factor-like protein 1.
   
 0.864
Tectb
Beta-tectorin.
      
 0.853
I79_011043
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.818
I79_015343
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.818
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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