STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ift140Intraflagellar transport protein 140-like. (1462 aa)    
Predicted Functional Partners:
Ift122
Intraflagellar transport protein 122-like.
   
 0.998
I79_008579
WD repeat-containing protein 35.
    
 0.994
Ttc21b
Tetratricopeptide repeat protein 21B.
   
 0.986
I79_022317
WD repeat-containing protein 19.
    
 0.965
I79_023732
WD repeat-containing protein 19.
    
 0.965
Ift20
Intraflagellar transport protein 20-like.
    
 0.893
Ift81
Intraflagellar transport protein 81-like.
    
 0.889
Ift52
Intraflagellar transport protein 52-like.
     
 0.884
Ift46
UPF0360 protein C11orf60-like.
     
 0.873
Ttc26
Tetratricopeptide repeat protein 26.
   
 
 0.872
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.