STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_008145Zinc finger protein 605. (769 aa)    
Predicted Functional Partners:
Erlec1
Endoplasmic reticulum lectin 1.
   
 0.780
Os9
Protein OS-9-like isoform 1.
   
 0.780
Katnal2
Katanin p60 ATPase-containing subunit A-like 2.
   
 0.760
I79_007383
Katanin p60 ATPase-containing subunit A-like 2.
   
 0.760
Spata5l1
Spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family.
    
 0.719
I79_012144
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.719
Spata5
Spermatogenesis-associated protein 5.
    
 0.719
Derl2
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.665
Derl3
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.665
I79_025694
Derlin-1.
    
 0.665
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (12%) [HD]