STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxa3Homeobox protein Hox-A3. (286 aa)    
Predicted Functional Partners:
I79_005672
Homeobox protein Hox-B3.
 
 
    0.768
I79_008450
Homeobox protein Hox-A5.
   
  
0.737
Hoxa2
Homeobox protein Hox-A2.
   
  
 0.716
Denr
Density-regulated protein; Belongs to the DENR family.
      
 0.699
Ddx39b
Spliceosome RNA helicase BAT1.
    
 
 0.692
Hbs1l
HBS1-like protein.
      
 0.679
Eif2d
Ligatin.
      
 0.672
Hoxa7
Homeobox protein Hox-A7.
   
  
0.665
I79_005670
Homeobox protein Hox-B4.
   
  
0.625
Asap1
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1.
      
 0.615
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.