STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btbd8Uncharacterized protein KIAA1107. (1172 aa)    
Predicted Functional Partners:
I79_008901
BTB/POZ domain-containing protein 8.
 
      0.897
Ptrh2
Peptidyl-tRNA hydrolase 2, mitochondrial.
      
 0.561
Trappc6b
Trafficking protein particle complex subunit 6B.
      
 0.559
Setd5
SET domain-containing protein 5.
      
 0.557
Ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.505
Palb2
Partner and localizer of BRCA2.
  
 0.505
I79_004983
Peroxisomal trans-2-enoyl-CoA reductase.
  
 0.504
Lrrc40
Leucine-rich repeat-containing protein 40.
    
 
 0.498
I79_023389
Tubulin polyglutamylase TTLL13.
      
 0.468
Trerf1
Transcriptional-regulating factor 1.
  
     0.446
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.