Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdh19 | I79_008277 | G3HFU3 | G3HCR3 | Cadherin-19; Cadherins are calcium-dependent cell adhesion proteins. | Sal-like protein 3. | 0.428 |
Cdh19 | I79_009461 | G3HFU3 | G3HFU4 | Cadherin-19; Cadherins are calcium-dependent cell adhesion proteins. | Cadherin-19. | 0.446 |
I79_008277 | Cdh19 | G3HCR3 | G3HFU3 | Sal-like protein 3. | Cadherin-19; Cadherins are calcium-dependent cell adhesion proteins. | 0.428 |
I79_008277 | I79_009461 | G3HCR3 | G3HFU4 | Sal-like protein 3. | Cadherin-19. | 0.428 |
I79_009461 | Cdh19 | G3HFU4 | G3HFU3 | Cadherin-19. | Cadherin-19; Cadherins are calcium-dependent cell adhesion proteins. | 0.446 |
I79_009461 | I79_008277 | G3HFU4 | G3HCR3 | Cadherin-19. | Sal-like protein 3. | 0.428 |
I79_009461 | Pdzk1 | G3HFU4 | G3H2R4 | Cadherin-19. | Na(+)/H(+) exchange regulatory cofactor NHE-RF3. | 0.435 |
Pdzk1 | I79_009461 | G3H2R4 | G3HFU4 | Na(+)/H(+) exchange regulatory cofactor NHE-RF3. | Cadherin-19. | 0.435 |