Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dag1 | I79_009842 | G3H8F4 | G3HGV1 | Dystroglycan. | Pikachurin. | 0.880 |
Dag1 | I79_021015 | G3H8F4 | G3IBJ3 | Dystroglycan. | Protein O-mannosyl-transferase 1. | 0.926 |
Dag1 | Nrxn2 | G3H8F4 | G3I6G9 | Dystroglycan. | Neurexin-2-alpha. | 0.737 |
Dag1 | Pomgnt1 | G3H8F4 | G3GYN7 | Dystroglycan. | Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1. | 0.883 |
Dag1 | Pomt2 | G3H8F4 | G3H646 | Dystroglycan. | Protein O-mannosyl-transferase 2. | 0.924 |
I79_007383 | I79_009842 | G3HAD5 | G3HGV1 | Katanin p60 ATPase-containing subunit A-like 2. | Pikachurin. | 0.602 |
I79_007383 | Katnal2 | G3HAD5 | G3HAD4 | Katanin p60 ATPase-containing subunit A-like 2. | Katanin p60 ATPase-containing subunit A-like 2. | 0.956 |
I79_009842 | Dag1 | G3HGV1 | G3H8F4 | Pikachurin. | Dystroglycan. | 0.880 |
I79_009842 | I79_007383 | G3HGV1 | G3HAD5 | Pikachurin. | Katanin p60 ATPase-containing subunit A-like 2. | 0.602 |
I79_009842 | I79_014532 | G3HGV1 | G3HUC4 | Pikachurin. | Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1. | 0.580 |
I79_009842 | I79_021015 | G3HGV1 | G3IBJ3 | Pikachurin. | Protein O-mannosyl-transferase 1. | 0.583 |
I79_009842 | Katnal2 | G3HGV1 | G3HAD4 | Pikachurin. | Katanin p60 ATPase-containing subunit A-like 2. | 0.602 |
I79_009842 | Nrxn2 | G3HGV1 | G3I6G9 | Pikachurin. | Neurexin-2-alpha. | 0.733 |
I79_009842 | Pomgnt1 | G3HGV1 | G3GYN7 | Pikachurin. | Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1. | 0.699 |
I79_009842 | Pomt2 | G3HGV1 | G3H646 | Pikachurin. | Protein O-mannosyl-transferase 2. | 0.766 |
I79_009842 | Rpl14 | G3HGV1 | G3I196 | Pikachurin. | 60S ribosomal protein L14. | 0.624 |
I79_009842 | Sdc1 | G3HGV1 | G3HDJ3 | Pikachurin. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.690 |
I79_014532 | I79_009842 | G3HUC4 | G3HGV1 | Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1. | Pikachurin. | 0.580 |
I79_021015 | Dag1 | G3IBJ3 | G3H8F4 | Protein O-mannosyl-transferase 1. | Dystroglycan. | 0.926 |
I79_021015 | I79_009842 | G3IBJ3 | G3HGV1 | Protein O-mannosyl-transferase 1. | Pikachurin. | 0.583 |
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