Ntsr1 protein (Cricetulus griseus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Ntsr1

Neurotensin receptor type 1; Belongs to the G-protein coupled receptor 1 family. (394 aa)

Predicted Functional Partners:

Ntsr2

0.930

Arrb1

0.825

Gna15

0.767

Gna11

0.759

Gnaq

0.759

I79_021638

0.752

I79_002785

0.629

I79_012926

0.597

Cck

0.561

CgPICR_013836

0.551

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arrb1	I79_002785	G3IIY3	G3GYB1	Beta-arrestin-1.	Beta-arrestin-2.	0.962
Arrb1	Ntsr1	G3IIY3	G3HGX1	Beta-arrestin-1.	Neurotensin receptor type 1; Belongs to the G-protein coupled receptor 1 family.	0.825
Arrb1	Ntsr2	G3IIY3	G3HB15	Beta-arrestin-1.	Neurotensin receptor type 2; Belongs to the G-protein coupled receptor 1 family.	0.693
Cck	Ntsr1	G3H992	G3HGX1	Cholecystokinin.	Neurotensin receptor type 1; Belongs to the G-protein coupled receptor 1 family.	0.561
Cck	Ntsr2	G3H992	G3HB15	Cholecystokinin.	Neurotensin receptor type 2; Belongs to the G-protein coupled receptor 1 family.	0.561
CgPICR_013836	Gna11	G3IAH8	G3HSI8	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein subunit alpha-11.	0.608
CgPICR_013836	Gna15	G3IAH8	G3HSI9	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein subunit alpha-15.	0.637
CgPICR_013836	Gnaq	G3IAH8	G3IAG1	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.608
CgPICR_013836	I79_021638	G3IAH8	G3ID65	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein subunit alpha-14.	0.608
CgPICR_013836	Ntsr1	G3IAH8	G3HGX1	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Neurotensin receptor type 1; Belongs to the G-protein coupled receptor 1 family.	0.551
CgPICR_013836	Ntsr2	G3IAH8	G3HB15	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Neurotensin receptor type 2; Belongs to the G-protein coupled receptor 1 family.	0.551
Gna11	CgPICR_013836	G3HSI8	G3IAH8	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.608
Gna11	Gna15	G3HSI8	G3HSI9	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein subunit alpha-15.	0.416
Gna11	Gnaq	G3HSI8	G3IAG1	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.903
Gna11	Ntsr1	G3HSI8	G3HGX1	Guanine nucleotide-binding protein subunit alpha-11.	Neurotensin receptor type 1; Belongs to the G-protein coupled receptor 1 family.	0.759
Gna15	CgPICR_013836	G3HSI9	G3IAH8	Guanine nucleotide-binding protein subunit alpha-15.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.637
Gna15	Gna11	G3HSI9	G3HSI8	Guanine nucleotide-binding protein subunit alpha-15.	Guanine nucleotide-binding protein subunit alpha-11.	0.416
Gna15	Gnaq	G3HSI9	G3IAG1	Guanine nucleotide-binding protein subunit alpha-15.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.412
Gna15	I79_021638	G3HSI9	G3ID65	Guanine nucleotide-binding protein subunit alpha-15.	Guanine nucleotide-binding protein subunit alpha-14.	0.408
Gna15	Ntsr1	G3HSI9	G3HGX1	Guanine nucleotide-binding protein subunit alpha-15.	Neurotensin receptor type 1; Belongs to the G-protein coupled receptor 1 family.	0.767