Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Diaph1 | Stmn3 | G3HYE2 | G3HGZ6 | Protein diaphanous-like 1. | Stathmin; Belongs to the stathmin family. | 0.535 |
Dynlt1 | Stmn3 | G3HWC5 | G3HGZ6 | Dynein light chain Tctex-type 1. | Stathmin; Belongs to the stathmin family. | 0.448 |
Dynlt3 | Stmn3 | G3HY85 | G3HGZ6 | Dynein light chain Tctex-type 3-like protein. | Stathmin; Belongs to the stathmin family. | 0.449 |
Gak | I79_011286 | G3HEE4 | G3HKQ7 | Cyclin G-associated kinase. | Microtubule-associated protein. | 0.529 |
Gak | I79_025812 | G3HEE4 | G3IPA6 | Cyclin G-associated kinase. | Microtubule-associated protein. | 0.530 |
Gak | Stmn3 | G3HEE4 | G3HGZ6 | Cyclin G-associated kinase. | Stathmin; Belongs to the stathmin family. | 0.437 |
Gng3 | Slc1a2 | G3II34 | G3GYZ2 | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | Amino acid transporter. | 0.664 |
Gng3 | Slc32a1 | G3II34 | G3GXZ8 | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | Vesicular inhibitory amino acid transporter. | 0.633 |
Gng3 | Stmn3 | G3II34 | G3HGZ6 | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | Stathmin; Belongs to the stathmin family. | 0.476 |
Hoxa2 | Stmn3 | G3HD71 | G3HGZ6 | Homeobox protein Hox-A2. | Stathmin; Belongs to the stathmin family. | 0.498 |
I79_011286 | Gak | G3HKQ7 | G3HEE4 | Microtubule-associated protein. | Cyclin G-associated kinase. | 0.529 |
I79_011286 | Stmn3 | G3HKQ7 | G3HGZ6 | Microtubule-associated protein. | Stathmin; Belongs to the stathmin family. | 0.678 |
I79_025812 | Gak | G3IPA6 | G3HEE4 | Microtubule-associated protein. | Cyclin G-associated kinase. | 0.530 |
I79_025812 | Stmn3 | G3IPA6 | G3HGZ6 | Microtubule-associated protein. | Stathmin; Belongs to the stathmin family. | 0.628 |
Slc1a2 | Gng3 | G3GYZ2 | G3II34 | Amino acid transporter. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.664 |
Slc1a2 | Slc32a1 | G3GYZ2 | G3GXZ8 | Amino acid transporter. | Vesicular inhibitory amino acid transporter. | 0.525 |
Slc1a2 | Stmn3 | G3GYZ2 | G3HGZ6 | Amino acid transporter. | Stathmin; Belongs to the stathmin family. | 0.601 |
Slc32a1 | Gng3 | G3GXZ8 | G3II34 | Vesicular inhibitory amino acid transporter. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.633 |
Slc32a1 | Slc1a2 | G3GXZ8 | G3GYZ2 | Vesicular inhibitory amino acid transporter. | Amino acid transporter. | 0.525 |
Slc32a1 | Stmn3 | G3GXZ8 | G3HGZ6 | Vesicular inhibitory amino acid transporter. | Stathmin; Belongs to the stathmin family. | 0.481 |
page 1 of 2