Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arhgap25 | I79_007507 | G3HIB7 | G3HAP9 | Rho GTPase-activating protein 25. | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | 0.418 |
Arhgap25 | I79_012384 | G3HIB7 | G3HNP2 | Rho GTPase-activating protein 25. | Leukocyte common antigen. | 0.404 |
Arhgap25 | I79_016143 | G3HIB7 | G3HYK6 | Rho GTPase-activating protein 25. | Dihydropyrimidinase-related protein 3. | 0.448 |
Arhgap25 | I79_021527 | G3HIB7 | G3ICX3 | Rho GTPase-activating protein 25. | Serine/threonine-protein kinase 32A; Belongs to the protein kinase superfamily. | 0.564 |
Arhgap25 | Mtrf1l | G3HIB7 | G3GU28 | Rho GTPase-activating protein 25. | Peptide chain release factor 1-like, mitochondrial. | 0.418 |
I79_007507 | Arhgap25 | G3HAP9 | G3HIB7 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | Rho GTPase-activating protein 25. | 0.418 |
I79_007507 | Mtrf1l | G3HAP9 | G3GU28 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | Peptide chain release factor 1-like, mitochondrial. | 0.422 |
I79_012384 | Arhgap25 | G3HNP2 | G3HIB7 | Leukocyte common antigen. | Rho GTPase-activating protein 25. | 0.404 |
I79_016143 | Arhgap25 | G3HYK6 | G3HIB7 | Dihydropyrimidinase-related protein 3. | Rho GTPase-activating protein 25. | 0.448 |
I79_016143 | I79_021527 | G3HYK6 | G3ICX3 | Dihydropyrimidinase-related protein 3. | Serine/threonine-protein kinase 32A; Belongs to the protein kinase superfamily. | 0.471 |
I79_021527 | Arhgap25 | G3ICX3 | G3HIB7 | Serine/threonine-protein kinase 32A; Belongs to the protein kinase superfamily. | Rho GTPase-activating protein 25. | 0.564 |
I79_021527 | I79_016143 | G3ICX3 | G3HYK6 | Serine/threonine-protein kinase 32A; Belongs to the protein kinase superfamily. | Dihydropyrimidinase-related protein 3. | 0.471 |
Mtrf1l | Arhgap25 | G3GU28 | G3HIB7 | Peptide chain release factor 1-like, mitochondrial. | Rho GTPase-activating protein 25. | 0.418 |
Mtrf1l | I79_007507 | G3GU28 | G3HAP9 | Peptide chain release factor 1-like, mitochondrial. | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | 0.422 |