Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdc42 | I79_002944 | G3HIM4 | G3GYN9 | Cell division control protein 42-like. | Phosphatidylinositol 3-kinase regulatory subunit gamma. | 0.949 |
Cdc42 | I79_010779 | G3HIM4 | G3HJD6 | Cell division control protein 42-like. | Pleckstrin-likey domain-containing family G member 2. | 0.450 |
Cdc42 | I79_014637 | G3HIM4 | G3HUM6 | Cell division control protein 42-like. | Muscle M-line assembly protein unc-89. | 0.844 |
Cdc42 | Plekhg2 | G3HIM4 | G3HJD7 | Cell division control protein 42-like. | Pleckstrin-likey domain-containing family G member 2. | 0.450 |
I79_002944 | Cdc42 | G3GYN9 | G3HIM4 | Phosphatidylinositol 3-kinase regulatory subunit gamma. | Cell division control protein 42-like. | 0.949 |
I79_002944 | I79_010779 | G3GYN9 | G3HJD6 | Phosphatidylinositol 3-kinase regulatory subunit gamma. | Pleckstrin-likey domain-containing family G member 2. | 0.410 |
I79_002944 | Plekhg2 | G3GYN9 | G3HJD7 | Phosphatidylinositol 3-kinase regulatory subunit gamma. | Pleckstrin-likey domain-containing family G member 2. | 0.410 |
I79_010779 | Cdc42 | G3HJD6 | G3HIM4 | Pleckstrin-likey domain-containing family G member 2. | Cell division control protein 42-like. | 0.450 |
I79_010779 | I79_002944 | G3HJD6 | G3GYN9 | Pleckstrin-likey domain-containing family G member 2. | Phosphatidylinositol 3-kinase regulatory subunit gamma. | 0.410 |
I79_010779 | I79_014637 | G3HJD6 | G3HUM6 | Pleckstrin-likey domain-containing family G member 2. | Muscle M-line assembly protein unc-89. | 0.542 |
I79_010779 | Plekhg2 | G3HJD6 | G3HJD7 | Pleckstrin-likey domain-containing family G member 2. | Pleckstrin-likey domain-containing family G member 2. | 0.903 |
I79_012655 | Il33 | G3HPE4 | G3I4V3 | DNA-directed RNA polymerase I subunit RPA34. | Interleukin-33. | 0.402 |
I79_012655 | Plekhg2 | G3HPE4 | G3HJD7 | DNA-directed RNA polymerase I subunit RPA34. | Pleckstrin-likey domain-containing family G member 2. | 0.440 |
I79_014637 | Cdc42 | G3HUM6 | G3HIM4 | Muscle M-line assembly protein unc-89. | Cell division control protein 42-like. | 0.844 |
I79_014637 | I79_010779 | G3HUM6 | G3HJD6 | Muscle M-line assembly protein unc-89. | Pleckstrin-likey domain-containing family G member 2. | 0.542 |
I79_014637 | Plekhg2 | G3HUM6 | G3HJD7 | Muscle M-line assembly protein unc-89. | Pleckstrin-likey domain-containing family G member 2. | 0.542 |
I79_021870 | Plekhg2 | G3IDT4 | G3HJD7 | CD177 antigen. | Pleckstrin-likey domain-containing family G member 2. | 0.441 |
Il33 | I79_012655 | G3I4V3 | G3HPE4 | Interleukin-33. | DNA-directed RNA polymerase I subunit RPA34. | 0.402 |
Il33 | Plekhg2 | G3I4V3 | G3HJD7 | Interleukin-33. | Pleckstrin-likey domain-containing family G member 2. | 0.458 |
Plekhg2 | Cdc42 | G3HJD7 | G3HIM4 | Pleckstrin-likey domain-containing family G member 2. | Cell division control protein 42-like. | 0.450 |
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