Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2m | Cd4 | G3H0S7 | G3GUN9 | Beta-2-microglobulin. | T-cell surface glycoprotein CD4. | 0.789 |
B2m | I79_011202 | G3H0S7 | G3HKH6 | Beta-2-microglobulin. | T-cell surface glycoprotein CD1d1. | 0.980 |
B2m | Ifng | G3H0S7 | G3GY20 | Beta-2-microglobulin. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons. | 0.521 |
Cd4 | B2m | G3GUN9 | G3H0S7 | T-cell surface glycoprotein CD4. | Beta-2-microglobulin. | 0.789 |
Cd4 | Cd83 | G3GUN9 | G3H0F4 | T-cell surface glycoprotein CD4. | CD83 antigen. | 0.868 |
Cd4 | I79_005968 | G3GUN9 | G3H6K3 | T-cell surface glycoprotein CD4. | CD40 ligand; Belongs to the tumor necrosis factor family. | 0.852 |
Cd4 | I79_011202 | G3GUN9 | G3HKH6 | T-cell surface glycoprotein CD4. | T-cell surface glycoprotein CD1d1. | 0.685 |
Cd4 | I79_015395 | G3GUN9 | G3HWN4 | T-cell surface glycoprotein CD4. | Replication protein A 30 kDa subunit. | 0.501 |
Cd4 | I79_021156 | G3GUN9 | G3IBX3 | T-cell surface glycoprotein CD4. | C-type lectin domain family 4 member K. | 0.440 |
Cd4 | Ifng | G3GUN9 | G3GY20 | T-cell surface glycoprotein CD4. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons. | 0.966 |
Cd4 | Rpa2 | G3GUN9 | G3H201 | T-cell surface glycoprotein CD4. | Replication protein A 32 kDa subunit. | 0.501 |
Cd5l | I79_005968 | G3HG57 | G3H6K3 | CD5 antigen-like. | CD40 ligand; Belongs to the tumor necrosis factor family. | 0.422 |
Cd5l | I79_011202 | G3HG57 | G3HKH6 | CD5 antigen-like. | T-cell surface glycoprotein CD1d1. | 0.566 |
Cd5l | I79_021156 | G3HG57 | G3IBX3 | CD5 antigen-like. | C-type lectin domain family 4 member K. | 0.525 |
Cd83 | Cd4 | G3H0F4 | G3GUN9 | CD83 antigen. | T-cell surface glycoprotein CD4. | 0.868 |
Cd83 | I79_005968 | G3H0F4 | G3H6K3 | CD83 antigen. | CD40 ligand; Belongs to the tumor necrosis factor family. | 0.493 |
Cd83 | I79_011202 | G3H0F4 | G3HKH6 | CD83 antigen. | T-cell surface glycoprotein CD1d1. | 0.575 |
Cd83 | Ifng | G3H0F4 | G3GY20 | CD83 antigen. | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons. | 0.608 |
I79_005968 | Cd4 | G3H6K3 | G3GUN9 | CD40 ligand; Belongs to the tumor necrosis factor family. | T-cell surface glycoprotein CD4. | 0.852 |
I79_005968 | Cd5l | G3H6K3 | G3HG57 | CD40 ligand; Belongs to the tumor necrosis factor family. | CD5 antigen-like. | 0.422 |
page 1 of 3