STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnnc2Troponin C, skeletal muscle. (145 aa)    
Predicted Functional Partners:
Syt8
Synaptotagmin-8.
   
 0.998
Tnnt2
Troponin T, cardiac muscle.
   
 0.974
Tnni1
Troponin I, slow skeletal muscle.
   
 0.966
Atp2a1
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
   
 
 0.966
I79_000313
Myosin regulatory light chain 2, skeletal muscle isoform type 2.
   
 0.924
Mylpf
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 0.924
Smim20
Uncharacterized protein LOC389203.
   
 0.916
Actn3
Alpha-actinin-3.
   
 0.892
Nxph3
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.875
I79_002310
Actin, alpha skeletal muscle; Belongs to the actin family.
   
 0.795
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.