STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CgPICR_01390860S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)    
Predicted Functional Partners:
I79_012295
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.973
I79_018235
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.973
Fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.973
I79_024935
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.973
Rpl14
60S ribosomal protein L14.
   
 0.912
Rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.900
Etf1
Eukaryotic peptide chain release factor subunit 1.
   
 0.892
I79_024471
Ubiquitin.
   
 0.888
Rpl22l1
60S ribosomal protein L22-like 1.
   
 0.887
Rpl15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 0.884
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.