STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GorabRAB6-interacting golgin. (367 aa)    
Predicted Functional Partners:
Arf5
ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.807
Dars2
Aspartyl-tRNA synthetase, mitochondrial.
      
 0.730
Scyl1
SCYL1.
   
 
 0.706
Rchy1
RING finger and CHY zinc finger domain-containing protein 1.
    
 
 0.643
Gatad2a
Transcriptional repressor p66 alpha.
      
 0.594
Atp6v0a2
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
      
 0.526
Pdik1l
Serine/threonine-protein kinase PDIK1L; Belongs to the protein kinase superfamily.
      
 0.495
Sucnr1
Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.495
H671_7g18352
Pyrroline-5-carboxylate reductase 1, mitochondrial.
      
 0.475
St6gal1
Beta-galactoside alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
      
 0.469
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.