STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppfia1Liprin-alpha-1. (1201 aa)    
Predicted Functional Partners:
I79_014942
Regulating synaptic membrane exocytosis protein 2.
   
 0.968
Kdelr3
ER lumen protein retaining receptor 3.
      
 0.875
I79_000592
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.834
I79_009306
Receptor-type tyrosine-protein phosphatase F.
    
 0.799
I79_009530
Receptor-type tyrosine-protein phosphatase delta.
   
 0.743
Erc1
ELKS/RAB6-interacting/CAST family member 1.
    
 
 0.731
Ppfibp1
Liprin-beta-1.
   
0.708
Ptprs
Receptor-type tyrosine-protein phosphatase S.
    
 0.686
I79_008197
Receptor-type tyrosine-protein phosphatase S.
    
 0.686
I79_021657
Liprin-beta-2.
   
0.685
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.