Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fam124a | Wdr49 | G3H0M5 | G3HQA0 | Protein FAM124A. | WD repeat-containing protein 49. | 0.446 |
Fam20a | Wdr49 | G3H852 | G3HQA0 | Protein FAM20A. | WD repeat-containing protein 49. | 0.447 |
Fam20b | Wdr49 | G3HW14 | G3HQA0 | Protein FAM20B. | WD repeat-containing protein 49. | 0.447 |
Gas8 | Wdr49 | G3GRP5 | G3HQA0 | Growth arrest-specific protein 8. | WD repeat-containing protein 49. | 0.412 |
Grifin | I79_013375 | G3GVF1 | G3HRB0 | Galectin. | FERM domain-containing protein 7. | 0.408 |
Grifin | Nuak2 | G3GVF1 | G3HAX7 | Galectin. | NUAK family SNF1-like kinase 2. | 0.408 |
Grifin | Plekhh3 | G3GVF1 | G3HLY2 | Galectin. | Pleckstrin-likey domain-containing family H member 3. | 0.410 |
Grifin | Wdr49 | G3GVF1 | G3HQA0 | Galectin. | WD repeat-containing protein 49. | 0.435 |
I79_013375 | Grifin | G3HRB0 | G3GVF1 | FERM domain-containing protein 7. | Galectin. | 0.408 |
I79_013375 | Nuak2 | G3HRB0 | G3HAX7 | FERM domain-containing protein 7. | NUAK family SNF1-like kinase 2. | 0.408 |
I79_013375 | Plekhh3 | G3HRB0 | G3HLY2 | FERM domain-containing protein 7. | Pleckstrin-likey domain-containing family H member 3. | 0.414 |
I79_013375 | Wdr49 | G3HRB0 | G3HQA0 | FERM domain-containing protein 7. | WD repeat-containing protein 49. | 0.414 |
Nuak2 | Grifin | G3HAX7 | G3GVF1 | NUAK family SNF1-like kinase 2. | Galectin. | 0.408 |
Nuak2 | I79_013375 | G3HAX7 | G3HRB0 | NUAK family SNF1-like kinase 2. | FERM domain-containing protein 7. | 0.408 |
Nuak2 | Plekhh3 | G3HAX7 | G3HLY2 | NUAK family SNF1-like kinase 2. | Pleckstrin-likey domain-containing family H member 3. | 0.429 |
Nuak2 | Wdr49 | G3HAX7 | G3HQA0 | NUAK family SNF1-like kinase 2. | WD repeat-containing protein 49. | 0.412 |
PIGK | Wdr49 | G3GVT9 | G3HQA0 | GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family. | WD repeat-containing protein 49. | 0.561 |
Plekhh3 | Grifin | G3HLY2 | G3GVF1 | Pleckstrin-likey domain-containing family H member 3. | Galectin. | 0.410 |
Plekhh3 | I79_013375 | G3HLY2 | G3HRB0 | Pleckstrin-likey domain-containing family H member 3. | FERM domain-containing protein 7. | 0.414 |
Plekhh3 | Nuak2 | G3HLY2 | G3HAX7 | Pleckstrin-likey domain-containing family H member 3. | NUAK family SNF1-like kinase 2. | 0.429 |
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