STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_01427260S ribosomal protein L4. (175 aa)    
Predicted Functional Partners:
I79_012295
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
I79_018235
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
Fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
I79_024935
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
Rpl14
60S ribosomal protein L14.
  
 0.948
Rps20
40S ribosomal protein S20.
  
 0.944
Rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.942
I79_019169
40S ribosomal protein S17.
   
 0.941
I79_010198
40S ribosomal protein S5.
  
 0.939
CgPICR_017184
40S ribosomal protein S19.
   
 0.939
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.