STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_015092RING finger protein 39. (233 aa)    
Predicted Functional Partners:
Tcf19
Transcription factor 19-like protein.
      
 0.574
Mog
Myelin-oligodendrocyte glycoprotein.
      
 0.574
I79_018734
Lymphocyte antigen 6H.
      
 0.573
Slurp1
Secreted Ly-6/uPAR-related protein 1.
      
 0.566
Id1
DNA-binding protein inhibitor ID-1.
    
 
 0.563
I79_013138
H-2 class I histocompatibility antigen, D-D alpha chain; Belongs to the MHC class I family.
      
 0.562
Polr1h
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 
 0.561
Abcf1
ATP-binding cassette sub-family F member 1.
    
 
 0.558
Ubc
Ubiquitin.
   
 0.456
I79_023201
Apical endosomal glycoprotein.
  
 
  0.439
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.