Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Chmp6 | Mvb12a | G3GX54 | G3H4D9 | Charged multivesicular body protein 6. | Multivesicular body subunit 12A-like protein. | 0.623 |
Chmp6 | Snf8 | G3GX54 | G3HJN4 | Charged multivesicular body protein 6. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.960 |
Chmp6 | Ubap1 | G3GX54 | G3I852 | Charged multivesicular body protein 6. | Ubiquitin-associated protein 1. | 0.518 |
Chmp6 | Uevld | G3GX54 | G3I257 | Charged multivesicular body protein 6. | Ubiquitin-conjugating enzyme E2 variant 3. | 0.789 |
Chmp6 | Vps25 | G3GX54 | G3HLY6 | Charged multivesicular body protein 6. | Vacuolar protein-sorting-associated protein 25. | 0.964 |
Chmp6 | Vps28 | G3GX54 | G3HWL5 | Charged multivesicular body protein 6. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.958 |
Chmp6 | Vps36 | G3GX54 | G3HHJ4 | Charged multivesicular body protein 6. | Vacuolar protein-sorting-associated protein 36. | 0.935 |
Chmp6 | Vps37b | G3GX54 | G3IC08 | Charged multivesicular body protein 6. | Vacuolar protein sorting-associated protein 37B. | 0.761 |
Chmp6 | Vps37c | G3GX54 | G3IM56 | Charged multivesicular body protein 6. | Vacuolar protein sorting-associated protein 37C. | 0.590 |
Chmp6 | Vps37d | G3GX54 | G3HA09 | Charged multivesicular body protein 6. | Vacuolar protein sorting-associated protein 37D. | 0.534 |
Mvb12a | Chmp6 | G3H4D9 | G3GX54 | Multivesicular body subunit 12A-like protein. | Charged multivesicular body protein 6. | 0.623 |
Mvb12a | Snf8 | G3H4D9 | G3HJN4 | Multivesicular body subunit 12A-like protein. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.874 |
Mvb12a | Ubap1 | G3H4D9 | G3I852 | Multivesicular body subunit 12A-like protein. | Ubiquitin-associated protein 1. | 0.818 |
Mvb12a | Uevld | G3H4D9 | G3I257 | Multivesicular body subunit 12A-like protein. | Ubiquitin-conjugating enzyme E2 variant 3. | 0.984 |
Mvb12a | Vps25 | G3H4D9 | G3HLY6 | Multivesicular body subunit 12A-like protein. | Vacuolar protein-sorting-associated protein 25. | 0.890 |
Mvb12a | Vps28 | G3H4D9 | G3HWL5 | Multivesicular body subunit 12A-like protein. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.990 |
Mvb12a | Vps36 | G3H4D9 | G3HHJ4 | Multivesicular body subunit 12A-like protein. | Vacuolar protein-sorting-associated protein 36. | 0.897 |
Mvb12a | Vps37b | G3H4D9 | G3IC08 | Multivesicular body subunit 12A-like protein. | Vacuolar protein sorting-associated protein 37B. | 0.982 |
Mvb12a | Vps37c | G3H4D9 | G3IM56 | Multivesicular body subunit 12A-like protein. | Vacuolar protein sorting-associated protein 37C. | 0.961 |
Mvb12a | Vps37d | G3H4D9 | G3HA09 | Multivesicular body subunit 12A-like protein. | Vacuolar protein sorting-associated protein 37D. | 0.935 |
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