Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I79_003087 | I79_016606 | G3GZ36 | G3HZU2 | Myosin-13; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Testis anion transporter 1. | 0.554 |
I79_004077 | I79_016606 | G3H1M8 | G3HZU2 | Protein FAM71D. | Testis anion transporter 1. | 0.416 |
I79_016606 | I79_003087 | G3HZU2 | G3GZ36 | Testis anion transporter 1. | Myosin-13; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.554 |
I79_016606 | I79_004077 | G3HZU2 | G3H1M8 | Testis anion transporter 1. | Protein FAM71D. | 0.416 |
I79_016606 | I79_025212 | G3HZU2 | G3IMR7 | Testis anion transporter 1. | Uncharacterized protein. | 0.416 |
I79_016606 | Lyrm4 | G3HZU2 | G3GZ26 | Testis anion transporter 1. | LYR motif-containing protein 4; Belongs to the complex I LYR family. | 0.416 |
I79_016606 | Mre11 | G3HZU2 | G3HSN6 | Testis anion transporter 1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.437 |
I79_016606 | NADH4 | G3HZU2 | Q27PP6 | Testis anion transporter 1. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.523 |
I79_016606 | Prim2 | G3HZU2 | G3HZP7 | Testis anion transporter 1. | DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. | 0.453 |
I79_016606 | Racgap1 | G3HZU2 | G3HX62 | Testis anion transporter 1. | Rac GTPase-activating protein 1. | 0.601 |
I79_025212 | I79_016606 | G3IMR7 | G3HZU2 | Uncharacterized protein. | Testis anion transporter 1. | 0.416 |
I79_025212 | Mre11 | G3IMR7 | G3HSN6 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.705 |
I79_025212 | NADH4 | G3IMR7 | Q27PP6 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.578 |
Lyrm4 | I79_016606 | G3GZ26 | G3HZU2 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | Testis anion transporter 1. | 0.416 |
Lyrm4 | Mre11 | G3GZ26 | G3HSN6 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.705 |
Lyrm4 | NADH4 | G3GZ26 | Q27PP6 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.634 |
Mre11 | I79_016606 | G3HSN6 | G3HZU2 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Testis anion transporter 1. | 0.437 |
Mre11 | I79_025212 | G3HSN6 | G3IMR7 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein. | 0.705 |
Mre11 | Lyrm4 | G3HSN6 | G3GZ26 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | LYR motif-containing protein 4; Belongs to the complex I LYR family. | 0.705 |
Mre11 | Prim2 | G3HSN6 | G3HZP7 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. | 0.708 |
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