STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slx4Structure-specific endonuclease subunit SLX4. (1731 aa)    
Predicted Functional Partners:
I79_000086
Bifunctional aminoacyl-tRNA synthetase.
  
 0.999
Mus81
Crossover junction endonuclease MUS81.
  
 0.993
Ercc4
DNA repair endonuclease XPF.
  
 0.983
Wrn
Werner syndrome ATP-dependent helicase-like.
   
 0.972
H671_21027
DNA excision repair protein ERCC-1.
   
 0.967
Fancm
Fanconi anemia group M protein-like.
  
 0.956
Yars1
Tyrosine--tRNA ligase.
  
 0.955
I79_016684
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
 
 0.927
I79_018346
Structure-specific endonuclease subunit SLX1.
   
 0.918
Slx1a
Structure-specific endonuclease subunit SLX1.
   
 0.918
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.