STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apobec1C->U-editing enzyme APOBEC-1. (86 aa)    
Predicted Functional Partners:
A1cf
APOBEC1 complementation factor.
    
 0.822
Taf12
Transcription initiation factor TFIID subunit 12.
      
 0.741
Rbm47
RNA-binding protein 47.
    
 0.626
Apoc2
Apolipoprotein C-II.
  
   
 0.614
Scp2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.598
Apob
Apolipoprotein B-100.
      
 0.591
Tet1
Methylcytosine dioxygenase TET1.
  
   
 0.549
Apobec2
Putative C->U-editing enzyme APOBEC-2.
    
 0.540
UNG
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
     
 0.502
I79_003342
Apolipoprotein B-100.
      
 0.485
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.