STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EcdProtein SGT1-like. (640 aa)    
Predicted Functional Partners:
Aar2
Uncharacterized protein C20orf4-like.
    
 
 0.917
Snrnp200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 
 0.851
Tssc4
Protein TSSC4.
    
 
 0.720
Eftud2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.606
Ascc3
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.577
I79_017029
Putative ATP-dependent DNA helicase HFM1.
   
 
 0.567
Acd
Putative adrenocortical dysplasia protein like protein.
      
 0.565
Znhit2
Zinc finger HIT domain-containing protein 2.
    
 
 0.557
CUNH6orf226
Uncharacterized protein C6orf226-like.
      
 0.555
Prpf8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.526
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.