STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H671_3g9402Interferon regulatory factor 7. (473 aa)    
Predicted Functional Partners:
Traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.907
I79_023218
Interferon regulatory factor 3.
   
0.903
Isg15
Ubiquitin-like protein ISG15-like protein.
   
 0.895
Myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.884
Ddx58
Putative ATP-dependent RNA helicase DDX58.
   
 0.800
Ifih1
Interferon-induced helicase C domain-containing protein 1.
   
 0.774
Usp18
Ubl carboxyl-terminal hydrolase 18.
   
 0.772
I79_012974
Putative ubiquitin carboxyl-terminal hydrolase 41.
   
 0.772
Traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.771
I79_000870
Receptor-transporting protein 4.
   
  
 0.770
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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